Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iodothyronine deiodinase | LV84_01027 | Not Available | Positive | 1148609 - 1149289 | 25789.9 |
| alpha-l-fucosidase | LV84_01028 | Not Available | Positive | 1149532 - 1150878 | 51346.5 |
| ribonucleoside-diphosphate reductase class ii | LV84_01029 | Not Available | Positive | 1151280 - 1153844 | 96547.4 |
| hypothetical protein | LV84_01030 | Not Available | Positive | 1154087 - 1154281 | 6858.43 |
| hypothetical protein | LV84_01031 | Not Available | Positive | 1154293 - 1155423 | 43303.1 |
| atp synthase f1 subcomplex epsilon subunit | LV84_01032 | Not Available | Negative | 1155515 - 1155760 | 8492.25 |
| f-type h+-transporting atpase subunit beta | LV84_01033 | Not Available | Negative | 1155881 - 1157383 | 54212.2 |
| nlpc/p60 family protein | LV84_01034 | Not Available | Negative | 1157535 - 1158014 | 17780.4 |
| hypothetical protein | LV84_01035 | Not Available | Positive | 1158120 - 1158359 | 9674.72 |
| d-alanine-d-alanine ligase | LV84_01036 | Not Available | Positive | 1158535 - 1159536 | 37568.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
