Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar o-acyltransferase (sialic acid o-acetyltransferase neud family) | LV84_01017 | Not Available | Negative | 1138354 - 1138989 | 22189.5 |
| uncharacterized protein duf2851 | LV84_01018 | Not Available | Negative | 1139046 - 1140341 | 50250.2 |
| orotidine-5'-phosphate decarboxylase | LV84_01019 | Not Available | Negative | 1140442 - 1141257 | 29928.8 |
| hypothetical protein | LV84_01020 | Not Available | Negative | 1141519 - 1142418 | 33392.1 |
| glycosyltransferase involved in cell wall biosynthesis | LV84_01021 | Not Available | Negative | 1142461 - 1143426 | 36269.8 |
| 4-amino-4-deoxy-l-arabinose transferase-like glycosyltransferase | LV84_01022 | Not Available | Positive | 1143585 - 1145222 | 61470.5 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | LV84_01023 | Not Available | Negative | 1145219 - 1146721 | 57507.3 |
| putative sigma-54 modulation protein | LV84_01024 | Not Available | Negative | 1146791 - 1147096 | 11788.2 |
| integrase/recombinase xerc | LV84_01025 | Not Available | Negative | 1147133 - 1148017 | 34170.2 |
| ribosomal protein s21 | LV84_01026 | Not Available | Negative | 1148147 - 1148428 | 10861.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
