Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated lipoprotein gldd | LV84_01007 | Not Available | Negative | 1127972 - 1128547 | 21724.8 |
| putative damage-inducible protein dinb | LV84_01008 | Not Available | Positive | 1128624 - 1129154 | 19089.9 |
| nitroreductase | LV84_01009 | Not Available | Negative | 1129217 - 1129819 | 22764.2 |
| 3-methyladenine dna glycosylase alkd | LV84_01010 | Not Available | Negative | 1129910 - 1130629 | 28033.7 |
| outer membrane receptor protein involved in fe transport | LV84_01011 | Not Available | Negative | 1130658 - 1133096 | 91568.8 |
| histidine kinase/dna gyrase b/hsp90-like atpase | LV84_01012 | Not Available | Positive | 1133376 - 1135358 | 74730.4 |
| luxr family two component transcriptional regulator | LV84_01013 | Not Available | Positive | 1135351 - 1135986 | 23687.0 |
| hypothetical protein | LV84_01014 | Not Available | Positive | 1136100 - 1136375 | 10769.0 |
| uridine phosphorylase | LV84_01015 | Not Available | Negative | 1136390 - 1137247 | 31864.6 |
| upf0176 protein | LV84_01016 | Not Available | Negative | 1137256 - 1138224 | 37030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
