Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00987 | Not Available | Positive | 1107094 - 1107579 | 18511.8 |
| fumarase class ii | LV84_00988 | Not Available | Positive | 1107654 - 1109054 | 50260.4 |
| hypothetical protein | LV84_00989 | Not Available | Negative | 1109457 - 1109666 | 7720.38 |
| na+/h+-dicarboxylate symporter | LV84_00990 | Not Available | Negative | 1109846 - 1111174 | 46847.9 |
| chorismate synthase | LV84_00991 | Not Available | Negative | 1111185 - 1112270 | 39148.8 |
| oxygen tolerance protein batd | LV84_00992 | Not Available | Negative | 1112270 - 1113718 | 54442.6 |
| hypothetical protein | LV84_00993 | Not Available | Positive | 1113832 - 1114020 | 7645.41 |
| amt family ammonium transporter | LV84_00994 | Not Available | Negative | 1114080 - 1115273 | 41896.5 |
| nitrogen regulatory protein p-ii family | LV84_00995 | Not Available | Negative | 1115345 - 1115722 | 14202.6 |
| hypothetical protein | LV84_00996 | Not Available | Positive | 1115963 - 1116868 | 33417.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
