Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus ratkowskyi |
| Strain | strain DSM 22686 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | saline lake cyanobacterial mats; sea ice |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1516046 bp
Thymine Count
1505068 bp
Guanine Count
980277 bp
Cytosine Count
983951 bp
Genome Length
4994706 bp
Protein-coding Genes
4263 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV84_00087 | Not Available | Positive | 107166 - 107324 | 6051.25 |
| gmp synthase (glutamine-hydrolysing) | LV84_00088 | Not Available | Negative | 107420 - 108949 | 55981.1 |
| hypothetical protein | LV84_00089 | Not Available | Positive | 109346 - 109951 | 22547.8 |
| peptidase m28-like protein | LV84_00090 | Not Available | Positive | 110003 - 111712 | 63581.6 |
| phosphotriesterase-related protein | LV84_00091 | Not Available | Negative | 111847 - 112848 | 37149.3 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV84_00092 | Not Available | Negative | 113091 - 113771 | 24138.8 |
| gtp cyclohydrolase i | LV84_00093 | Not Available | Negative | 114435 - 115139 | 26718.0 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | LV84_00094 | Not Available | Negative | 115099 - 115509 | 16125.1 |
| l,d-transpeptidase-like protein | LV84_00095 | Not Available | Positive | 115800 - 116495 | 25380.6 |
| murein l,d-transpeptidase ycbb/ykud | LV84_00096 | Not Available | Negative | 116475 - 118130 | 62645.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
