Algoriphagus chordae strain DSM 19830

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus chordae strain DSM 19830 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology and optimal growth at 25.0°C. This organism is part of the genus Algoriphagus, which is known for its adaptation to marine environments. As a member of the family Flavobacteriaceae, A. chordae contributes to biogeochemical cycles, particularly in aquatic ecosystems. The Gram-negative nature of A. chordae indicates a complex cell wall structure, which includes an outer membrane containing lipopolysaccharides, contributing to its resilience in various environmental conditions. The aerobic requirement suggests that this bacterium relies on oxygen for its metabolic processes, utilizing aerobic respiration to derive energy, which may influence its distribution in oxygen-rich habitats. Given its optimal growth temperature of 25.0°C, A. chordae is likely well-suited for temperate marine environments, where water temperatures commonly align with this range. This trait may provide insights into its ecological role, particularly in the degradation of organic matter in cold marine waters, where the metabolic activities of such microorganisms are pivotal for nutrient cycling and maintaining ecosystem health. Overall, the physiological characteristics of Algoriphagus chordae strain DSM 19830 indicate its potential importance in marine microbiology, particularly in the context of environmental sustainability and nutrient recycling in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus chordae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus chordae strain DSM 19830

Accession NumberQKZT00000000.1

Gene Summary

Adenine Count

1543700 bp

Thymine Count

1533236 bp

Guanine Count

1041734 bp

Cytosine Count

1062115 bp

Genome Length

5189966 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinLV85_00001Not Available+153 - 84226720.5
hypothetical proteinLV85_00002Not Available+1519 - 273947357.2
short-subunit dehydrogenaseLV85_00003Not Available+2937 - 373429198.4
hypothetical proteinLV85_00004Not Available+3927 - 495539924.3
Ncrna_class:srp_rnaNot AvailableNot Available+4135 - 4224Not Available
l-amino acid n-acyltransferase yncaLV85_00005Not Available+5120 - 560818535.3
crp-like camp-binding proteinLV85_00006Not Available+5707 - 629122105.5
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)LV85_00007Not Available+6440 - 738435026.1
hypothetical proteinLV85_00008Not Available+7790 - 855431106.3
nucleotidyltransferase abieii toxin of type iv toxin-antitoxin systemLV85_00009Not Available+8551 - 965742185.9

Displaying genes 1 – 10 of 4395 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites