Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus chordae |
| Strain | strain DSM 19830 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1543700 bp
Thymine Count
1533236 bp
Guanine Count
1041734 bp
Cytosine Count
1062115 bp
Genome Length
5189966 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bnr repeat neuraminidase | LV85_00844 | Not Available | Negative | 981543 - 982913 | 51946.3 |
| putative permease | LV85_00845 | Not Available | Positive | 983492 - 985861 | 87865.6 |
| putative abc transport system permease protein | LV85_00846 | Not Available | Positive | 986151 - 988637 | 93507.3 |
| putative abc transport system permease protein | LV85_00847 | Not Available | Positive | 988994 - 991402 | 89930.9 |
| abc-type antimicrobial peptide transport system permease subunit | LV85_00848 | Not Available | Positive | 991718 - 994078 | 87974.3 |
| outer membrane protein beta-barrel domain-containing protein | LV85_00849 | Not Available | Negative | 994145 - 995029 | 34251.4 |
| mechanosensitive ion channel-like protein | LV85_00850 | Not Available | Negative | 995081 - 995983 | 33566.8 |
| putative amidohydrolase | LV85_00851 | Not Available | Positive | 996148 - 997689 | 59034.1 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | LV85_00852 | Not Available | Positive | 997671 - 998255 | 21924.4 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | LV85_00853 | Not Available | Positive | 998263 - 999093 | 30215.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
