Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus chordae |
| Strain | strain DSM 19830 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1543700 bp
Thymine Count
1533236 bp
Guanine Count
1041734 bp
Cytosine Count
1062115 bp
Genome Length
5189966 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | LV85_04374 | Not Available | Positive | 5140088 - 5142208 | 76916.0 |
| rna polymerase primary sigma factor | LV85_04375 | Not Available | Positive | 5142297 - 5143160 | 32800.4 |
| thioredoxin reductase (nadph) | LV85_04376 | Not Available | Positive | 5143344 - 5144288 | 33977.1 |
| lysm domain-containing protein | LV85_04377 | Not Available | Positive | 5144298 - 5145341 | 40013.5 |
| bacillithiol biosynthesis deacetylase bshb1 | LV85_04378 | Not Available | Positive | 5145354 - 5146073 | 27173.2 |
| pyridoxamine 5'-phosphate oxidase | LV85_04379 | Not Available | Negative | 5146074 - 5146706 | 24199.8 |
| putative transcriptional regulator | LV85_04380 | Not Available | Positive | 5146814 - 5147383 | 21422.5 |
| uncharacterized protein duf349 | LV85_04381 | Not Available | Positive | 5147432 - 5149636 | 84217.4 |
| Trna-thr | Not Available | Not Available | Positive | 5149737 - 5149812 | Not Available |
| transposase | LV85_04383 | Not Available | Positive | 5150272 - 5151321 | 40429.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
