Algoriphagus chordae strain DSM 19830

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus chordae strain DSM 19830 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and exhibits optimal growth at a temperature of 25°C, classifying it as mesophilic. It possesses a single replicon, which is indicative of its genetic organization and stability. The aerobic nature of Algoriphagus chordae suggests that it relies on oxygen for its metabolic processes, which may influence its ecological niche and interactions within its environment. The optimal growth temperature of 25°C aligns with conditions often found in various aquatic habitats, where such microorganisms may play a role in nutrient cycling and organic matter decomposition. The accession number QKZT00000000.1 provides a reference for genomic data associated with this strain, facilitating further research and understanding of its potential applications or ecological roles. Overall, the traits of Algoriphagus chordae strain DSM 19830 highlight its adaptability to mesophilic environments and its possible significance in aerobic microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus chordae
Strainstrain DSM 19830

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus chordae strain DSM 19830 LV85DRAFT_scaffold00046.46,

Gene Summary

Adenine Count

1543700 bp

Thymine Count

1533236 bp

Guanine Count

1041734 bp

Cytosine Count

1062115 bp

Genome Length

5189966 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lyttr family two component transcriptional regulatorLV85_04062Not AvailablePositive4819888 - 482056225875.8
hypothetical proteinLV85_04063Not AvailablePositive4820697 - 482186045832.5
sugar/nucleoside kinase (ribokinase family)LV85_04064Not AvailablePositive4822107 - 482310236137.8
putative zn-dependent peptidaseLV85_04065Not AvailablePositive4823302 - 482463350256.5
putative zn-dependent peptidaseLV85_04066Not AvailablePositive4824661 - 482670974747.4
hypothetical proteinLV85_04067Not AvailablePositive4826716 - 482744126313.9
putative metalloprotease with pdz domainLV85_04068Not AvailableNegative4827493 - 482913963465.4
large subunit ribosomal protein l34LV85_04069Not AvailablePositive4829279 - 48294376207.72
ribonuclease p protein componentLV85_04070Not AvailablePositive4829485 - 482987414916.3
carboxyl-terminal processing proteaseLV85_04071Not AvailablePositive4829867 - 483152862038.0

Displaying genes 4051 – 4060 of 4395 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.