Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus chordae |
| Strain | strain DSM 19830 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1543700 bp
Thymine Count
1533236 bp
Guanine Count
1041734 bp
Cytosine Count
1062115 bp
Genome Length
5189966 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein cas1 | LV85_03691 | Not Available | Negative | 4354403 - 4355398 | 37207.0 |
| uvrd-like helicase family protein | LV85_03692 | Not Available | Negative | 4355575 - 4356984 | 53307.8 |
| hypothetical protein | LV85_03693 | Not Available | Negative | 4356987 - 4357334 | 13059.5 |
| crispr-associated csx2 family protein | LV85_03694 | Not Available | Negative | 4357340 - 4358599 | 48221.9 |
| uncharacterized protein duf1887 | LV85_03695 | Not Available | Negative | 4358604 - 4359674 | 41213.7 |
| crispr-associated protein (tigr03986 family) | LV85_03696 | Not Available | Negative | 4359754 - 4362231 | 94962.7 |
| crispr type iii-associated protein (tigr04423 family) | LV85_03697 | Not Available | Negative | 4362228 - 4362644 | 15935.7 |
| crispr/cas system csm-associated protein csm3 (group 7 of ramp superfamily) | LV85_03698 | Not Available | Negative | 4362641 - 4364197 | 58350.9 |
| hypothetical protein | LV85_03699 | Not Available | Negative | 4364194 - 4365618 | 53665.5 |
| crispr/cas system csm-associated protein csm3 (group 7 of ramp superfamily) | LV85_03700 | Not Available | Negative | 4365615 - 4366187 | 20932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
