Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus chordae |
| Strain | strain DSM 19830 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1543700 bp
Thymine Count
1533236 bp
Guanine Count
1041734 bp
Cytosine Count
1062115 bp
Genome Length
5189966 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine1911/1915/1917 synthase | LV85_03571 | Not Available | Negative | 4179351 - 4180385 | 39228.0 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase-like pyridoxal-dependent acc family enzyme | LV85_03572 | Not Available | Positive | 4180444 - 4181358 | 34244.4 |
| putative dna-binding protein | LV85_03573 | Not Available | Negative | 4181406 - 4182050 | 24416.0 |
| excinuclease abc subunit b | LV85_03574 | Not Available | Negative | 4182180 - 4184222 | 77494.6 |
| uncharacterized protein duf4105 | LV85_03575 | Not Available | Negative | 4184603 - 4185781 | 45121.9 |
| putative secreted protein (por secretion system target) | LV85_03576 | Not Available | Positive | 4185823 - 4188126 | 84197.4 |
| gnt-i system high-affinity gluconate transporter | LV85_03577 | Not Available | Positive | 4188338 - 4189651 | 46376.6 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | LV85_03578 | Not Available | Positive | 4189675 - 4190148 | 16943.7 |
| membrane-bound lytic murein transglycosylase f | LV85_03579 | Not Available | Negative | 4190145 - 4191539 | 53075.4 |
| outer membrane protein tolc | LV85_03580 | Not Available | Negative | 4191673 - 4193019 | 51148.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
