Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus chordae |
| Strain | strain DSM 19830 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1543700 bp
Thymine Count
1533236 bp
Guanine Count
1041734 bp
Cytosine Count
1062115 bp
Genome Length
5189966 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | LV85_03521 | Not Available | Negative | 4124175 - 4124906 | 26863.0 |
| hypothetical protein | LV85_03522 | Not Available | Negative | 4124949 - 4125530 | 21785.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | LV85_03523 | Not Available | Negative | 4125534 - 4126652 | 40068.6 |
| acyl-coa thioester hydrolase | LV85_03524 | Not Available | Negative | 4126637 - 4127062 | 16392.8 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | LV85_03525 | Not Available | Negative | 4127117 - 4128361 | 44432.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | LV85_03526 | Not Available | Negative | 4128358 - 4129089 | 26283.6 |
| holo-[acyl-carrier protein] synthase | LV85_03527 | Not Available | Positive | 4129580 - 4129945 | 13415.1 |
| phenylacetate-coa ligase | LV85_03528 | Not Available | Negative | 4129997 - 4131286 | 48245.3 |
| tetratricopeptide repeat protein | LV85_03529 | Not Available | Negative | 4131283 - 4132956 | 62956.3 |
| cupin-like domain-containing protein | LV85_03530 | Not Available | Negative | 4132961 - 4133830 | 34593.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
