Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus chordae |
| Strain | strain DSM 19830 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1543700 bp
Thymine Count
1533236 bp
Guanine Count
1041734 bp
Cytosine Count
1062115 bp
Genome Length
5189966 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | LV85_03147 | Not Available | Negative | 3710040 - 3710375 | 12884.6 |
| superfamily i dna and/or rna helicase | LV85_03148 | Not Available | Negative | 3710517 - 3714392 | 146420.0 |
| short-subunit dehydrogenase | LV85_03149 | Not Available | Negative | 3714393 - 3715214 | 29656.1 |
| 23s rrna (uracil1939-c5)-methyltransferase | LV85_03150 | Not Available | Positive | 3715462 - 3716868 | 53335.9 |
| hypothetical protein | LV85_03151 | Not Available | Positive | 3716865 - 3717242 | 14672.3 |
| xaa-pro aminopeptidase | LV85_03152 | Not Available | Negative | 3717346 - 3718638 | 49463.3 |
| putative zn-dependent peptidase | LV85_03153 | Not Available | Positive | 3718994 - 3720223 | 46762.1 |
| putative o-methyltransferase yrrm | LV85_03154 | Not Available | Positive | 3720226 - 3720870 | 23939.3 |
| membrane-bound lytic murein transglycosylase d | LV85_03155 | Not Available | Positive | 3720938 - 3722518 | 58874.2 |
| protein of unknown function (duf3078) | LV85_03156 | Not Available | Positive | 3722543 - 3723529 | 36895.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
