Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus chordae |
| Strain | strain DSM 19830 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1543700 bp
Thymine Count
1533236 bp
Guanine Count
1041734 bp
Cytosine Count
1062115 bp
Genome Length
5189966 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | LV85_02887 | Not Available | Negative | 3395882 - 3399031 | 115891.0 |
| gntr family transcriptional repressor for pyruvate dehydrogenase complex | LV85_02888 | Not Available | Negative | 3399241 - 3399957 | 26497.3 |
| cytochrome c | LV85_02889 | Not Available | Negative | 3400177 - 3401877 | 63098.0 |
| pas domain s-box-containing protein | LV85_02890 | Not Available | Negative | 3401954 - 3403027 | 40710.8 |
| gtp-binding protein hflx | LV85_02891 | Not Available | Negative | 3403153 - 3404427 | 48522.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | LV85_02892 | Not Available | Positive | 3404603 - 3405154 | 20869.5 |
| tyrosine-protein phosphatase ywqe | LV85_02893 | Not Available | Positive | 3405154 - 3405900 | 28795.1 |
| nucleoside-diphosphate-sugar epimerase | LV85_02894 | Not Available | Positive | 3405916 - 3406869 | 35530.4 |
| flp pilus assembly protein tadd | LV85_02895 | Not Available | Positive | 3407015 - 3408430 | 54932.4 |
| phosphosulfolactate synthase | LV85_02896 | Not Available | Positive | 3408447 - 3409217 | 28769.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
