Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus chordae |
| Strain | strain DSM 19830 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1543700 bp
Thymine Count
1533236 bp
Guanine Count
1041734 bp
Cytosine Count
1062115 bp
Genome Length
5189966 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LV85_01979 | Not Available | Negative | 2300702 - 2301235 | 19421.0 |
| arac-like dna-binding protein | LV85_01980 | Not Available | Negative | 2301438 - 2302304 | 33415.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | LV85_01981 | Not Available | Positive | 2302437 - 2303327 | 33187.3 |
| nadp-dependent aldehyde dehydrogenase | LV85_01982 | Not Available | Positive | 2303426 - 2304970 | 55583.8 |
| 4-hydroxyproline epimerase | LV85_01983 | Not Available | Positive | 2305136 - 2306140 | 36983.5 |
| d-amino-acid dehydrogenase | LV85_01984 | Not Available | Positive | 2306263 - 2307510 | 45731.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV85_01985 | Not Available | Positive | 2307666 - 2308217 | 21502.6 |
| zinc carboxypeptidase | LV85_01986 | Not Available | Negative | 2308273 - 2309424 | 43949.7 |
| susd-like starch-binding protein associating with outer membrane | LV85_01987 | Not Available | Negative | 2309421 - 2310827 | 52294.6 |
| tonb-linked susc/raga family outer membrane protein | LV85_01988 | Not Available | Negative | 2310840 - 2314322 | 126561.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
