Algoriphagus chordae strain DSM 19830

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus chordae strain DSM 19830 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and exhibits optimal growth at a temperature of 25°C, classifying it as mesophilic. It possesses a single replicon, which is indicative of its genetic organization and stability. The aerobic nature of Algoriphagus chordae suggests that it relies on oxygen for its metabolic processes, which may influence its ecological niche and interactions within its environment. The optimal growth temperature of 25°C aligns with conditions often found in various aquatic habitats, where such microorganisms may play a role in nutrient cycling and organic matter decomposition. The accession number QKZT00000000.1 provides a reference for genomic data associated with this strain, facilitating further research and understanding of its potential applications or ecological roles. Overall, the traits of Algoriphagus chordae strain DSM 19830 highlight its adaptability to mesophilic environments and its possible significance in aerobic microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus chordae
Strainstrain DSM 19830

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus chordae strain DSM 19830 LV85DRAFT_scaffold00046.46,

Gene Summary

Adenine Count

1543700 bp

Thymine Count

1533236 bp

Guanine Count

1041734 bp

Cytosine Count

1062115 bp

Genome Length

5189966 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna pseudouridine2605 synthaseLV85_01939Not AvailableNegative2252867 - 225421050205.7
n-acetylmuramic acid 6-phosphate etheraseLV85_01940Not AvailableNegative2254339 - 225516029321.7
n-acetylglucosamine kinase-like badf-type atpaseLV85_01941Not AvailableNegative2255157 - 225599931711.5
putative heme/steroid binding proteinLV85_01942Not AvailableNegative2256000 - 22562278737.33
arginase family enzymeLV85_01943Not AvailableNegative2256227 - 225737844036.2
na+-transporting nadh:ubiquinone oxidoreductase subunit fLV85_01944Not AvailableNegative2257462 - 225876648475.9
acetyl-coa carboxylase carboxyl transferase subunit betaLV85_01945Not AvailableNegative2258899 - 225974130862.4
rna polymerase sigma factor (sigma-70 family)LV85_01946Not AvailablePositive2260153 - 226079725125.0
fecr family proteinLV85_01947Not AvailablePositive2260938 - 226198139782.5
tonb-linked susc/raga family outer membrane proteinLV85_01948Not AvailablePositive2262148 - 2265471123760.0

Displaying genes 1941 – 1950 of 4395 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.