Algoriphagus chordae strain DSM 19830

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus chordae strain DSM 19830 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile and exhibits optimal growth at a temperature of 25°C, classifying it as mesophilic. It possesses a single replicon, which is indicative of its genetic organization and stability. The aerobic nature of Algoriphagus chordae suggests that it relies on oxygen for its metabolic processes, which may influence its ecological niche and interactions within its environment. The optimal growth temperature of 25°C aligns with conditions often found in various aquatic habitats, where such microorganisms may play a role in nutrient cycling and organic matter decomposition. The accession number QKZT00000000.1 provides a reference for genomic data associated with this strain, facilitating further research and understanding of its potential applications or ecological roles. Overall, the traits of Algoriphagus chordae strain DSM 19830 highlight its adaptability to mesophilic environments and its possible significance in aerobic microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus chordae
Strainstrain DSM 19830

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus chordae strain DSM 19830 LV85DRAFT_scaffold00046.46,

Gene Summary

Adenine Count

1543700 bp

Thymine Count

1533236 bp

Guanine Count

1041734 bp

Cytosine Count

1062115 bp

Genome Length

5189966 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-linked susc/raga family outer membrane proteinLV85_01517Not AvailablePositive1793341 - 1796355110000.0
putative outer membrane starch-binding proteinLV85_01518Not AvailablePositive1796362 - 179803562719.2
tonb-linked susc/raga family outer membrane proteinLV85_01519Not AvailablePositive1798389 - 1801460116166.0
putative outer membrane starch-binding proteinLV85_01520Not AvailablePositive1801479 - 180331769588.5
laci family transcriptional regulatorLV85_01521Not AvailableNegative1803538 - 180456038060.9
glucuronate isomeraseLV85_01522Not AvailablePositive1804729 - 180616855200.0
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)LV85_01523Not AvailablePositive1806171 - 180698928725.7
mannonate dehydrataseLV85_01524Not AvailablePositive1807026 - 180820144074.7
maltose o-acetyltransferaseLV85_01525Not AvailablePositive1808198 - 180875220291.4
udp-glucuronate decarboxylaseLV85_01526Not AvailablePositive1808834 - 180976635152.5

Displaying genes 1521 – 1530 of 4395 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.