Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus chordae |
| Strain | strain DSM 19830 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1543700 bp
Thymine Count
1533236 bp
Guanine Count
1041734 bp
Cytosine Count
1062115 bp
Genome Length
5189966 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | LV85_01295 | Not Available | Negative | 1523587 - 1524498 | 32831.4 |
| putative endopeptidase | LV85_01296 | Not Available | Positive | 1524783 - 1526807 | 76541.7 |
| carboxypeptidase pm20d1 | LV85_01297 | Not Available | Negative | 1526861 - 1528303 | 53303.1 |
| hypothetical protein | LV85_01298 | Not Available | Positive | 1528504 - 1528764 | 10092.8 |
| zinc protease | LV85_01299 | Not Available | Positive | 1529038 - 1529550 | 18552.8 |
| mrna interferase mazf | LV85_01300 | Not Available | Positive | 1530221 - 1530466 | 8971.01 |
| glutaminyl-trna synthetase | LV85_01301 | Not Available | Negative | 1530924 - 1532969 | 77108.8 |
| hypothetical protein | LV85_01302 | Not Available | Positive | 1533529 - 1533705 | 6795.66 |
| 4-aminobutyrate aminotransferase/(s)-3-amino-2-methylpropionate transaminase | LV85_01303 | Not Available | Positive | 1533769 - 1535088 | 47666.5 |
| putative amidohydrolase | LV85_01304 | Not Available | Positive | 1535085 - 1536014 | 34576.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
