Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus chordae |
| Strain | strain DSM 19830 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1543700 bp
Thymine Count
1533236 bp
Guanine Count
1041734 bp
Cytosine Count
1062115 bp
Genome Length
5189966 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muramoyltetrapeptide carboxypeptidase | LV85_01074 | Not Available | Negative | 1250399 - 1251523 | 40799.4 |
| toxin yoeb | LV85_01075 | Not Available | Negative | 1252117 - 1252422 | 12067.6 |
| hypothetical protein | LV85_01076 | Not Available | Negative | 1252407 - 1252643 | 9196.01 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | LV85_01077 | Not Available | Negative | 1252889 - 1254181 | 49925.7 |
| uncharacterized membrane protein ygdd (tmem256/duf423 family) | LV85_01078 | Not Available | Negative | 1254184 - 1254561 | 13166.6 |
| acetyltransferase (gnat) family protein | LV85_01079 | Not Available | Negative | 1254877 - 1255815 | 35538.8 |
| polysaccharide export outer membrane protein | LV85_01080 | Not Available | Positive | 1256014 - 1256829 | 30053.1 |
| capsular exopolysaccharide synthesis family protein | LV85_01081 | Not Available | Positive | 1256835 - 1259294 | 93902.7 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | LV85_01082 | Not Available | Positive | 1259344 - 1260060 | 26685.9 |
| polysaccharide export outer membrane protein | LV85_01083 | Not Available | Positive | 1260156 - 1261013 | 32238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
