Pseudomonas sp. 478

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 478 is characterized by having a single replicon, which is significant for its genomic organization and stability. The genome of Pseudomonas sp. 478 is cataloged under the accession number QKZG00000000.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. Pseudomonas species are known for their metabolic versatility and adaptability to various environments, which can include soil, water, and plant surfaces. This adaptability is often linked to their ability to degrade a wide range of organic compounds, making them important players in bioremediation processes. The presence of only one replicon in Pseudomonas sp. 478 could suggest a streamlined genomic architecture, which may facilitate efficient replication and expression of genes crucial for survival in diverse ecological niches. Understanding the genetic characteristics of Pseudomonas sp. 478 can provide insights into its ecological role, particularly in nutrient cycling and its interactions with other microorganisms. The single replicon trait may also influence its evolutionary strategies, potentially making it well-suited for specific ecological functions. Thus, studying Pseudomonas sp. 478 can contribute to a deeper understanding of microbial ecology and the functional roles of bacteria in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 478
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 478
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 478 Ga0255685_134, whole genome shotgun sequence.

Gene Summary

Adenine Count

1328518 bp

Thymine Count

1302764 bp

Guanine Count

1868428 bp

Cytosine Count

1907639 bp

Genome Length

6407454 bp

Protein-coding Genes

5726 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
porphobilinogen synthaseDFS28_101382Not AvailablePositive399861 - 40087437194.6
polyphosphate kinaseDFS28_101383Not AvailablePositive400893 - 40311583256.0
Ncrna_class:antisense_rnaNot AvailableNot AvailablePositive403128 - 403217Not Available
ppx/gppa phosphataseDFS28_101385Not AvailableNegative403287 - 40478956380.8
amino acid abc transporter atp-binding protein (paat family)DFS28_101386Not AvailableNegative405033 - 40577026807.8
amino acid abc transporter membrane protein 2 (paat family)DFS28_101387Not AvailableNegative405757 - 40640723633.4
amino acid abc transporter membrane protein 1 (paat family)DFS28_101388Not AvailableNegative406404 - 40707524583.6
amino acid abc transporter substrate-binding protein (paat family)DFS28_101389Not AvailableNegative407097 - 40788228217.3
gntr family transcriptional repressor for pyruvate dehydrogenase complexDFS28_101390Not AvailablePositive408139 - 40884625236.4
thioredoxinDFS28_101391Not AvailablePositive408967 - 40929611791.2

Displaying genes 471 – 480 of 5896 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.