Pseudomonas sp. 478

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 478 is characterized by having a single replicon, which is significant for its genomic organization and stability. The genome of Pseudomonas sp. 478 is cataloged under the accession number QKZG00000000.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. Pseudomonas species are known for their metabolic versatility and adaptability to various environments, which can include soil, water, and plant surfaces. This adaptability is often linked to their ability to degrade a wide range of organic compounds, making them important players in bioremediation processes. The presence of only one replicon in Pseudomonas sp. 478 could suggest a streamlined genomic architecture, which may facilitate efficient replication and expression of genes crucial for survival in diverse ecological niches. Understanding the genetic characteristics of Pseudomonas sp. 478 can provide insights into its ecological role, particularly in nutrient cycling and its interactions with other microorganisms. The single replicon trait may also influence its evolutionary strategies, potentially making it well-suited for specific ecological functions. Thus, studying Pseudomonas sp. 478 can contribute to a deeper understanding of microbial ecology and the functional roles of bacteria in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 478
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 478
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 478 Ga0255685_134, whole genome shotgun sequence.

Gene Summary

Adenine Count

1328518 bp

Thymine Count

1302764 bp

Guanine Count

1868428 bp

Cytosine Count

1907639 bp

Genome Length

6407454 bp

Protein-coding Genes

5726 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arac-like dna-binding proteinDFS28_102203Not AvailablePositive939308 - 94030035777.2
cytochrome c biogenesis protein ccdaDFS28_102204Not AvailableNegative940310 - 94152143215.9
hypothetical proteinDFS28_102205Not AvailableNegative941864 - 9420767077.1
uncharacterized protein duf2790DFS28_102206Not AvailableNegative942125 - 9423889405.09
winged helix family two component transcriptional regulatorDFS28_102207Not AvailablePositive942694 - 94343427956.1
signal transduction histidine kinaseDFS28_102208Not AvailablePositive943431 - 94473247815.9
polyketide cyclase/dehydrase/lipid transport proteinDFS28_102209Not AvailableNegative944857 - 94526714618.1
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)DFS28_102210Not AvailableNegative945296 - 94609327729.1
d-threo-aldose 1-dehydrogenaseDFS28_102211Not AvailableNegative946096 - 94711236664.7
lysr family transcriptional regulatorDFS28_102212Not AvailablePositive947230 - 94814433775.7

Displaying genes 991 – 1000 of 5896 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.