Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EcMLT |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265792 bp
Thymine Count
1260893 bp
Guanine Count
1273703 bp
Cytosine Count
1272035 bp
Genome Length
5072423 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | DNQ45_01960 | Not Available | Positive | 338090 - 339793 | 62753.5 |
| yopn family type iii secretion system gatekeeper subunit | DNQ45_01965 | Not Available | Positive | 339798 - 340943 | 43495.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | DNQ45_01970 | Not Available | Positive | 340936 - 342996 | 76409.5 |
| flii/yscn family atpase | DNQ45_01975 | Not Available | Positive | 343001 - 344320 | 48466.4 |
| type iii secretion protein | DNQ45_01980 | Not Available | Positive | 344301 - 344768 | 18659.8 |
| effector protein | DNQ45_01990 | Not Available | Positive | 345004 - 345621 | 24035.3 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | DNQ45_02000 | Not Available | Positive | 346558 - 347223 | 24544.5 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | DNQ45_02005 | Not Available | Positive | 347233 - 347493 | 9430.85 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | DNQ45_02015 | Not Available | Positive | 348252 - 349364 | 43024.9 |
| invasion protein | DNQ45_02020 | Not Available | Negative | 349435 - 349728 | 11118.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





