Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EcMLT |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265792 bp
Thymine Count
1260893 bp
Guanine Count
1273703 bp
Cytosine Count
1272035 bp
Genome Length
5072423 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence/damage-inducible protein cina | DNQ45_08020 | Not Available | Negative | 1429406 - 1430617 | 44522.6 |
| hypothetical protein | DNQ45_08025 | Not Available | Negative | 1430717 - 1431259 | 18596.8 |
| nucleoside triphosphatase nudi | DNQ45_08030 | Not Available | Positive | 1431538 - 1431963 | 16396.7 |
| histidine phosphatase family protein | DNQ45_08035 | Not Available | Negative | 1432002 - 1432604 | 22305.8 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | DNQ45_08040 | Not Available | Positive | 1432912 - 1434051 | 41633.1 |
| is3 family transposase | DNQ45_08055 | Not Available | Negative | 1435704 - 1435967 | 9887.8 |
| chromosome partitioning protein parb | DNQ45_08250 | Not Available | Positive | 1463530 - 1464426 | 33925.4 |
| rela/spot family protein | DNQ45_08255 | Not Available | Negative | 1465479 - 1466384 | 35632.8 |
| hypothetical protein | DNQ45_08260 | Not Available | Negative | 1466384 - 1468489 | 80751.8 |
| duf4928 domain-containing protein | DNQ45_08270 | Not Available | Positive | 1469305 - 1469601 | 10813.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





