Xylanimonas oleitrophica strain PW21

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Promicromonosporaceae

Genus

Xylanimonas

Description

Xylanimonas oleitrophica strain PW21 is characterized by having a single replicon, which is significant for its genetic stability and ease of manipulation in laboratory settings. The strain is cataloged under the accession number QKWH00000000.1, which allows for its identification and retrieval in genomic databases. As a member of the genus Xylanimonas, this strain is likely to be involved in the degradation of complex organic compounds, contributing to processes such as bioremediation and carbon cycling in its native environment. The single replicon may indicate a streamlined genome, often associated with organisms adapted to specific ecological niches or metabolic pathways. The ecological role of Xylanimonas oleitrophica strain PW21 could involve the breakdown of recalcitrant substances, thereby facilitating nutrient cycling and supporting microbial diversity. The presence of such strains in an ecosystem can enhance the degradation of pollutants, leading to improved soil and water quality. Understanding the traits of Xylanimonas oleitrophica strain PW21 can provide insights into its potential applications in environmental biotechnology, particularly in efforts aimed at bioremediation and sustainable waste management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyPromicromonosporaceae
GenusXylanimonas
SpeciesXylanimonas oleitrophica
Strainstrain PW21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylanimonas oleitrophica strain PW21

Gene Summary

Adenine Count

453719 bp

Thymine Count

460850 bp

Guanine Count

1298263 bp

Cytosine Count

1277677 bp

Genome Length

3490509 bp

Protein-coding Genes

3081 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseDNL40_01475Not AvailableNegative319137 - 32014434423.9
succinyl-diaminopimelate desuccinylaseDNL40_01480Not AvailablePositive320181 - 32137140947.3
tigr00730 family rossman fold proteinDNL40_01485Not AvailablePositive321395 - 32222229435.9
dihydropteroate synthaseDNL40_01490Not AvailablePositive322309 - 32316029762.4
duf3117 domain-containing proteinDNL40_01495Not AvailablePositive323296 - 3234635689.99
methyltransferaseDNL40_01500Not AvailableNegative323573 - 32414519758.1
rna polymerase sigma factor sigeDNL40_01505Not AvailablePositive324367 - 32496322379.2
zf-hc2 domain-containing proteinDNL40_01510Not AvailablePositive324960 - 32595533609.9
peptidase s1DNL40_01515Not AvailablePositive325952 - 32740047317.7
sec-independent protein translocase tatbDNL40_01520Not AvailablePositive327464 - 32786513931.4

Displaying genes 351 – 360 of 3168 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.