Xylanimonas oleitrophica strain PW21

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Promicromonosporaceae

Genus

Xylanimonas

Description

Xylanimonas oleitrophica strain PW21 is characterized by having a single replicon, which is significant for its genetic stability and ease of manipulation in laboratory settings. The strain is cataloged under the accession number QKWH00000000.1, which allows for its identification and retrieval in genomic databases. As a member of the genus Xylanimonas, this strain is likely to be involved in the degradation of complex organic compounds, contributing to processes such as bioremediation and carbon cycling in its native environment. The single replicon may indicate a streamlined genome, often associated with organisms adapted to specific ecological niches or metabolic pathways. The ecological role of Xylanimonas oleitrophica strain PW21 could involve the breakdown of recalcitrant substances, thereby facilitating nutrient cycling and supporting microbial diversity. The presence of such strains in an ecosystem can enhance the degradation of pollutants, leading to improved soil and water quality. Understanding the traits of Xylanimonas oleitrophica strain PW21 can provide insights into its potential applications in environmental biotechnology, particularly in efforts aimed at bioremediation and sustainable waste management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyPromicromonosporaceae
GenusXylanimonas
SpeciesXylanimonas oleitrophica
Strainstrain PW21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylanimonas oleitrophica strain PW21

Gene Summary

Adenine Count

453719 bp

Thymine Count

460850 bp

Guanine Count

1298263 bp

Cytosine Count

1277677 bp

Genome Length

3490509 bp

Protein-coding Genes

3081 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iDNL40_13880Not AvailablePositive3007087 - 300983198408.6
llm class f420-dependent oxidoreductaseDNL40_13885Not AvailableNegative3009974 - 301093634768.7
sam-dependent methyltransferaseDNL40_13890Not AvailableNegative3011020 - 301183529103.9
6-phosphofructokinaseDNL40_13895Not AvailablePositive3011927 - 301295235720.0
30s ribosomal protein s1DNL40_13900Not AvailablePositive3013116 - 301459753952.3
nudix hydrolaseDNL40_13905Not AvailablePositive3014827 - 301539020350.1
abc transporter atp-binding proteinDNL40_13910Not AvailableNegative3015326 - 301733270358.6
marr family transcriptional regulatorDNL40_13915Not AvailablePositive3017439 - 301793317675.9
hypothetical proteinDNL40_13920Not AvailablePositive3018052 - 301879825997.3
hypothetical proteinDNL40_13925Not AvailablePositive3018792 - 301938519637.3

Displaying genes 2731 – 2740 of 3168 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.