Xylanimonas oleitrophica strain PW21

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Promicromonosporaceae

Genus

Xylanimonas

Description

Xylanimonas oleitrophica strain PW21 is characterized by having a single replicon, which is significant for its genetic stability and ease of manipulation in laboratory settings. The strain is cataloged under the accession number QKWH00000000.1, which allows for its identification and retrieval in genomic databases. As a member of the genus Xylanimonas, this strain is likely to be involved in the degradation of complex organic compounds, contributing to processes such as bioremediation and carbon cycling in its native environment. The single replicon may indicate a streamlined genome, often associated with organisms adapted to specific ecological niches or metabolic pathways. The ecological role of Xylanimonas oleitrophica strain PW21 could involve the breakdown of recalcitrant substances, thereby facilitating nutrient cycling and supporting microbial diversity. The presence of such strains in an ecosystem can enhance the degradation of pollutants, leading to improved soil and water quality. Understanding the traits of Xylanimonas oleitrophica strain PW21 can provide insights into its potential applications in environmental biotechnology, particularly in efforts aimed at bioremediation and sustainable waste management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyPromicromonosporaceae
GenusXylanimonas
SpeciesXylanimonas oleitrophica
Strainstrain PW21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylanimonas oleitrophica strain PW21

Gene Summary

Adenine Count

453719 bp

Thymine Count

460850 bp

Guanine Count

1298263 bp

Cytosine Count

1277677 bp

Genome Length

3490509 bp

Protein-coding Genes

3081 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome oxidase assembly proteinDNL40_11725Not AvailablePositive2534519 - 253545132646.6
adp-ribose pyrophosphataseDNL40_11730Not AvailableNegative2535510 - 253617523718.8
ctp synthaseDNL40_11735Not AvailableNegative2536172 - 253785460928.1
virulence factor mvinDNL40_11740Not AvailableNegative2538025 - 253974057380.0
hypothetical proteinDNL40_11745Not AvailableNegative2539737 - 254058226919.7
copper transporterDNL40_11750Not AvailableNegative2540582 - 254168237201.5
hypothetical proteinDNL40_11755Not AvailableNegative2541767 - 254296942099.6
dna repair protein recnDNL40_11760Not AvailableNegative2542975 - 254469959616.3
nad kinaseDNL40_11765Not AvailableNegative2544701 - 254569935423.1
tlya family rna methyltransferaseDNL40_11770Not AvailableNegative2545696 - 254661931411.7

Displaying genes 2311 – 2320 of 3168 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.