Xylanimonas oleitrophica strain PW21

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Promicromonosporaceae

Genus

Xylanimonas

Description

Xylanimonas oleitrophica strain PW21 is characterized by having a single replicon, which is significant for its genetic stability and ease of manipulation in laboratory settings. The strain is cataloged under the accession number QKWH00000000.1, which allows for its identification and retrieval in genomic databases. As a member of the genus Xylanimonas, this strain is likely to be involved in the degradation of complex organic compounds, contributing to processes such as bioremediation and carbon cycling in its native environment. The single replicon may indicate a streamlined genome, often associated with organisms adapted to specific ecological niches or metabolic pathways. The ecological role of Xylanimonas oleitrophica strain PW21 could involve the breakdown of recalcitrant substances, thereby facilitating nutrient cycling and supporting microbial diversity. The presence of such strains in an ecosystem can enhance the degradation of pollutants, leading to improved soil and water quality. Understanding the traits of Xylanimonas oleitrophica strain PW21 can provide insights into its potential applications in environmental biotechnology, particularly in efforts aimed at bioremediation and sustainable waste management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyPromicromonosporaceae
GenusXylanimonas
SpeciesXylanimonas oleitrophica
Strainstrain PW21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylanimonas oleitrophica strain PW21

Gene Summary

Adenine Count

453719 bp

Thymine Count

460850 bp

Guanine Count

1298263 bp

Cytosine Count

1277677 bp

Genome Length

3490509 bp

Protein-coding Genes

3081 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDNL40_07085Not AvailableNegative1512794 - 151343823601.8
glycosyl hydrolaseDNL40_07090Not AvailableNegative1513527 - 151594485303.1
beta-glucosidaseDNL40_07095Not AvailableNegative1516012 - 1519047107059.0
abc transporter atp-binding proteinDNL40_07100Not AvailablePositive1519450 - 152024728008.4
abc transporter permeaseDNL40_07105Not AvailablePositive1520247 - 152284786282.7
cytochrome c oxidase assembly proteinDNL40_07110Not AvailableNegative1522688 - 152359030816.3
duf2243 domain-containing proteinDNL40_07115Not AvailableNegative1523743 - 152416815073.4
yfce family phosphodiesteraseDNL40_07120Not AvailablePositive1524279 - 152478218000.5
cdgsh iron-sulfur domain-containing proteinDNL40_07125Not AvailableNegative1524788 - 15250218099.61
glycosyltransferase family 2 proteinDNL40_07130Not AvailableNegative1525018 - 152611839401.1

Displaying genes 1401 – 1410 of 3168 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.