Xylanimonas oleitrophica strain PW21

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Promicromonosporaceae

Genus

Xylanimonas

Description

Xylanimonas oleitrophica strain PW21 is characterized by having a single replicon, which is significant for its genetic stability and ease of manipulation in laboratory settings. The strain is cataloged under the accession number QKWH00000000.1, which allows for its identification and retrieval in genomic databases. As a member of the genus Xylanimonas, this strain is likely to be involved in the degradation of complex organic compounds, contributing to processes such as bioremediation and carbon cycling in its native environment. The single replicon may indicate a streamlined genome, often associated with organisms adapted to specific ecological niches or metabolic pathways. The ecological role of Xylanimonas oleitrophica strain PW21 could involve the breakdown of recalcitrant substances, thereby facilitating nutrient cycling and supporting microbial diversity. The presence of such strains in an ecosystem can enhance the degradation of pollutants, leading to improved soil and water quality. Understanding the traits of Xylanimonas oleitrophica strain PW21 can provide insights into its potential applications in environmental biotechnology, particularly in efforts aimed at bioremediation and sustainable waste management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyPromicromonosporaceae
GenusXylanimonas
SpeciesXylanimonas oleitrophica
Strainstrain PW21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylanimonas oleitrophica strain PW21

Gene Summary

Adenine Count

453719 bp

Thymine Count

460850 bp

Guanine Count

1298263 bp

Cytosine Count

1277677 bp

Genome Length

3490509 bp

Protein-coding Genes

3081 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permeaseDNL40_05255Not AvailableNegative1096369 - 109739437639.2
carbohydrate abc transporter substrate-binding proteinDNL40_05260Not AvailableNegative1097525 - 109882946194.1
duf2505 domain-containing proteinDNL40_05265Not AvailableNegative1099014 - 109952318060.1
atpaseDNL40_05270Not AvailablePositive1099639 - 110112353470.8
whib family transcriptional regulatorDNL40_05275Not AvailableNegative1101253 - 11015019274.04
hypothetical proteinDNL40_05280Not AvailablePositive1101743 - 110219514994.6
hypothetical proteinDNL40_05285Not AvailableNegative1102158 - 1106735151986.0
abc transporter permeaseDNL40_05290Not AvailableNegative1106877 - 110949587422.6
abc transporter atp-binding proteinDNL40_05295Not AvailableNegative1109495 - 111033729100.6
dna-binding response regulatorDNL40_05300Not AvailableNegative1110578 - 111136327504.9

Displaying genes 1041 – 1050 of 3168 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.