Rhodopseudomonas palustris strain XCP

BacilliMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas palustris strain XCP is a Gram-negative, facultative anaerobic bacterium characterized by its bacilli shape and the presence of flagella, which contribute to its mobility. This microorganism is free-living and can thrive in both aquatic and terrestrial environments, specifically favoring stratified aquatic habitats. It has an optimal growth temperature of 25°C and falls within the mesophilic temperature range, indicating its preference for moderate thermal conditions. Rhodopseudomonas palustris strain XCP possesses a single replicon, reflecting a streamlined genetic structure that is typical for many bacteria in its category. Its ability to adapt to varying oxygen levels suggests a versatile metabolic capacity, allowing it to utilize different energy sources in diverse environmental conditions. The ecological role of Rhodopseudomonas palustris strain XCP is significant, particularly in aquatic ecosystems where it can contribute to nutrient cycling and organic matter degradation. Its facultative anaerobic nature enables it to participate in both aerobic and anaerobic processes, potentially influencing the dynamics of microbial communities in stratified waters. Overall, the traits of this strain highlight its adaptability and ecological importance in both aquatic and terrestrial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas palustris
Strainstrain XCP

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodopseudomonas palustris strain XCP
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
Habitataquatic; stratified aquatic environments; terrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopseudomonas palustris strain XCP PROK_000042, whole genome

Gene Summary

Adenine Count

975211 bp

Thymine Count

968409 bp

Guanine Count

1811129 bp

Cytosine Count

1834173 bp

Genome Length

5590663 bp

Protein-coding Genes

4970 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadph:quinone oxidoreductase family proteinDNX69_16980Not AvailablePositive3647555 - 364852934202.6
amine oxidaseDNX69_16985Not AvailableNegative3648576 - 365071175669.4
tetr/acrr family transcriptional regulatorDNX69_16990Not AvailablePositive3650852 - 365146922499.5
duf1232 domain-containing proteinDNX69_16995Not AvailableNegative3651485 - 365185913955.9
4a-hydroxytetrahydrobiopterin dehydrataseDNX69_17000Not AvailableNegative3651942 - 365224411215.3
trap transporter substrate-binding proteinDNX69_17005Not AvailablePositive3652381 - 365381450405.7
pepsy domain-containing proteinDNX69_17010Not AvailableNegative3653818 - 365526354315.1
tonb-dependent siderophore receptorDNX69_17015Not AvailableNegative3655268 - 365754782129.2
translational gtpase typaDNX69_17020Not AvailablePositive3658256 - 366007967268.3
fad-dependent oxidoreductaseDNX69_17025Not AvailablePositive3660190 - 366145845026.2

Displaying genes 3351 – 3360 of 5126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.