Rhodopseudomonas palustris strain XCP

BacilliMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas palustris strain XCP is a Gram-negative, facultative anaerobic bacterium characterized by its bacilli shape and the presence of flagella, which contribute to its mobility. This microorganism is free-living and can thrive in both aquatic and terrestrial environments, specifically favoring stratified aquatic habitats. It has an optimal growth temperature of 25°C and falls within the mesophilic temperature range, indicating its preference for moderate thermal conditions. Rhodopseudomonas palustris strain XCP possesses a single replicon, reflecting a streamlined genetic structure that is typical for many bacteria in its category. Its ability to adapt to varying oxygen levels suggests a versatile metabolic capacity, allowing it to utilize different energy sources in diverse environmental conditions. The ecological role of Rhodopseudomonas palustris strain XCP is significant, particularly in aquatic ecosystems where it can contribute to nutrient cycling and organic matter degradation. Its facultative anaerobic nature enables it to participate in both aerobic and anaerobic processes, potentially influencing the dynamics of microbial communities in stratified waters. Overall, the traits of this strain highlight its adaptability and ecological importance in both aquatic and terrestrial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas palustris
Strainstrain XCP

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodopseudomonas palustris strain XCP
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
Habitataquatic; stratified aquatic environments; terrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopseudomonas palustris strain XCP PROK_000042, whole genome

Gene Summary

Adenine Count

975211 bp

Thymine Count

968409 bp

Guanine Count

1811129 bp

Cytosine Count

1834173 bp

Genome Length

5590663 bp

Protein-coding Genes

4970 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrogenase cofactor biosynthesis protein nifbDNX69_13725Not AvailableNegative2926845 - 292840156167.4
4fe-4s dicluster domain-containing proteinDNX69_13730Not AvailableNegative2928559 - 29287536860.25
nif-specific transcriptional activator nifaDNX69_13735Not AvailableNegative2929028 - 293078264971.7
oxidoreductaseDNX69_13740Not AvailableNegative2931094 - 293191529028.9
xanthine dehydrogenaseDNX69_13745Not AvailablePositive2932249 - 293310330294.5
ferrous iron transporter bDNX69_13750Not AvailableNegative2933160 - 293504067609.9
ferrous iron transport protein aDNX69_13755Not AvailableNegative2935078 - 293536810605.0
methyl-accepting chemotaxis proteinDNX69_13760Not AvailableNegative2935990 - 293768159111.1
ribulose 1,5-bisphosphate carboxylaseDNX69_13765Not AvailableNegative2938396 - 293978150546.9
fructose-bisphosphate aldolase class iiDNX69_13770Not AvailableNegative2939840 - 294092539316.2

Displaying genes 2701 – 2710 of 5126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.