Acidithiobacillus ferrooxidans strain CCM 4253

Gram-negativeSpirillaNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Acidithiobacillia

Order

Acidithiobacillales

Family

Acidithiobacillaceae

Genus

Acidithiobacillus

Description

Acidithiobacillus ferrooxidans strain CCM 4253 is a Gram-negative, nonsporulating spirillum that thrives as an obligate chemoautolithotroph, utilizing inorganic compounds as its primary energy source. This strain exhibits optimal growth at a temperature of 30.0°C and requires oxygen for its metabolic processes, categorizing it as an aerobe. The specialized habitat of A. ferrooxidans CCM 4253 likely includes environments with high concentrations of iron and sulfur, where it plays a crucial role in biogeochemical cycling by oxidizing ferrous iron and sulfur compounds. This metabolic activity not only supports its growth but also contributes to the transformation of these elements in its ecosystem. Understanding the physiological traits of this strain is essential for applications in bioleaching and bioremediation, where its unique energy metabolism can be harnessed for the extraction of metals from ores or the detoxification of contaminated sites. The adaptation of A. ferrooxidans CCM 4253 to its specialized habitat underscores the intricate relationships between microbial life and mineral substrates in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAcidithiobacillia
OrderAcidithiobacillales
FamilyAcidithiobacillaceae
GenusAcidithiobacillus
SpeciesAcidithiobacillus ferrooxidans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceObligate chemoautolithotroph
PathogenicityNot Available

Genome Summary

Acidithiobacillus ferrooxidans strain CCM 4253

Accession NumberQKQP00000000.1

Gene Summary

Adenine Count

670933 bp

Thymine Count

651512 bp

Guanine Count

917308 bp

Cytosine Count

956731 bp

Genome Length

3196562 bp

Protein-coding Genes

3059 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
competence/damage-inducible protein aDN052_00005Not Available+102 - 85427796.4
dihydrolipoyl dehydrogenaseDN052_00010Not Available+956 - 234449278.5
polyphosphate kinase 2DN052_00015Not Available+2379 - 316430685.8
ribonuclease rDN052_00020Not Available-3182 - 542284749.2
Trna-leuNot AvailableNot Available+5460 - 5546Not Available
adenylosuccinate synthaseDN052_00030Not Available-5597 - 689246459.6
atp phosphoribosyltransferase regulatory subunitDN052_00035Not Available-6935 - 813744322.0
protease modulator hflcDN052_00040Not Available-8134 - 900632160.7
ftsh protease activity modulator hflkDN052_00045Not Available-9003 - 1019642921.6
gtpase hflxDN052_00050Not Available-10211 - 1150947472.4

Displaying genes 1 – 10 of 1247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

53 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da

Displaying 1–10 of 53 metabolites