Pseudomonas sp. TKO29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. TKO29 is characterized by having a single replicon, which is indicative of its genetic structure. The accession number for this strain is QKLM00000000.1, which serves as a unique identifier for its genomic sequence in biological databases. Pseudomonas species are known for their versatility and adaptability in various environments, often playing significant roles in ecological systems. They are typically found in soil, water, and plant-associated environments, where they can contribute to nutrient cycling and the degradation of organic matter. The presence of Pseudomonas sp. TKO29 may suggest its potential role in bioremediation or other ecological functions, although specific traits or capabilities of this strain have not been provided. The single replicon structure of Pseudomonas sp. TKO29 could facilitate its genetic stability and adaptability, allowing it to respond efficiently to environmental changes. This trait may also influence its ability to acquire or lose genetic material, which is a common feature among Pseudomonas species. In summary, Pseudomonas sp. TKO29, with its single replicon and distinct genomic accession, represents the diverse capabilities of Pseudomonas species. While the specific ecological roles of this strain remain undefined, its genetic configuration hints at potential adaptability and functionality within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. TKO29
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. TKO29
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. TKO29 PairedContig_121, whole genome shotgun

Gene Summary

Adenine Count

1251054 bp

Thymine Count

1280295 bp

Guanine Count

2192770 bp

Cytosine Count

2141270 bp

Genome Length

6865389 bp

Protein-coding Genes

6008 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
voc family proteinDNK61_08420Not AvailableNegative1782592 - 178309518607.2
tonb-dependent siderophore receptorDNK61_08425Not AvailableNegative1783179 - 178565990814.5
iron dicitrate transport regulator fecrDNK61_08430Not AvailableNegative1785761 - 178673836025.0
rna polymerase subunit sigmaDNK61_08435Not AvailableNegative1786745 - 178727820381.7
pts sugar transporter subunit iicDNK61_08440Not AvailablePositive1787601 - 178968876327.1
hypothetical proteinDNK61_08445Not AvailableNegative1789698 - 179214290299.5
short-chain dehydrogenaseDNK61_08450Not AvailablePositive1792426 - 179359842572.8
ggdef domain-containing proteinDNK61_08455Not AvailablePositive1793696 - 179465235588.4
microcin abc transporter atp-binding proteinDNK61_08460Not AvailableNegative1794916 - 179652659454.6
abc transporter permeaseDNK61_08465Not AvailableNegative1796528 - 179754737958.7

Displaying genes 1751 – 1760 of 6187 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.