Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas koreensis |
| Strain | strain LB-090714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Korean agricultural soil; rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1215652 bp
Thymine Count
1215590 bp
Guanine Count
1826143 bp
Cytosine Count
1812822 bp
Genome Length
6070527 bp
Protein-coding Genes
5331 genes
Non-Coding Genes
164 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | DMX04_08670 | Not Available | Negative | 1847668 - 1849014 | 50203.9 |
| type vi secretion system lipoprotein tssj | DMX04_08675 | Not Available | Negative | 1849052 - 1850401 | 49144.4 |
| type vi secretion system baseplate subunit tssg | DMX04_08680 | Not Available | Negative | 1850398 - 1851420 | 39068.6 |
| type vi secretion system baseplate subunit tssf | DMX04_08685 | Not Available | Negative | 1851384 - 1853150 | 66981.9 |
| type vi secretion system baseplate subunit tsse | DMX04_08690 | Not Available | Negative | 1853158 - 1853571 | 15540.4 |
| type vi secretion system contractile sheath large subunit | DMX04_08695 | Not Available | Negative | 1853572 - 1855044 | 55262.3 |
| type vi secretion system contractile sheath small subunit | DMX04_08700 | Not Available | Negative | 1855083 - 1855586 | 18451.1 |
| type vi secretion system-associated protein tago | DMX04_08705 | Not Available | Positive | 1855981 - 1856586 | 22348.9 |
| type vi secretion system protein tssa | DMX04_08710 | Not Available | Positive | 1856574 - 1858010 | 53521.6 |
| type vi secretion system membrane subunit tssm | DMX04_08715 | Not Available | Positive | 1858020 - 1861628 | 136196.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








