Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Avibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Avibacterium |
| Species | Avibacterium paragallinarum |
| Strain | strain SCPM-O-B-8407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Gallus gallus, Aves |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
757983 bp
Thymine Count
753900 bp
Guanine Count
527013 bp
Cytosine Count
515814 bp
Genome Length
2554710 bp
Protein-coding Genes
2249 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Portal vertex protein | DM481_00380 | Not Available | Negative | 55575 - 56612 | 38464.4 |
| Terminase atpase subunit | DM481_00385 | Not Available | Negative | 56616 - 58421 | 69425.6 |
| Capsid-scaffolding protein | DM481_00390 | Not Available | Positive | 58601 - 59500 | 33037.5 |
| Capsid protein | DM481_00395 | Not Available | Positive | 59503 - 60513 | 36938.7 |
| Terminase endonuclease subunit | DM481_00400 | Not Available | Positive | 60525 - 61346 | 30890.0 |
| Head completion/stabilization protein | DM481_00405 | Not Available | Positive | 61339 - 61791 | 16948.5 |
| Tail completion protein r | DM481_00410 | Not Available | Positive | 61779 - 62249 | 18046.4 |
| Virion morphogenesis protein | DM481_00415 | Not Available | Positive | 62242 - 62922 | 25749.8 |
| Tail sheath | DM481_00420 | Not Available | Positive | 62948 - 64075 | 41684.4 |
| Tail tube | DM481_00425 | Not Available | Positive | 64080 - 64535 | 16349.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infectious coryza | Causes | PMC10269479 |
| Infectious coryza | Causes | PMC11909890 |
| Avian infectious coryza | Causes | PMC11909890 |
| Infectious coryza | Causes | PMC8913951 |
| Ic | Causes | PMC8913951 |
