Sinimarinibacterium flocculans strain DSM 104150

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Nevskiales

Family

Nevskiaceae

Genus

Sinimarinibacterium

Description

Sinimarinibacterium flocculans strain DSM 104150 is a microbial strain characterized by a single replicon, indicating a simplified genomic structure. The strain has been assigned the accession number QICN00000000.1, which serves as a unique identifier for its genomic data. The specific traits of Sinimarinibacterium flocculans suggest that it may play a role in ecological systems, particularly in marine environments where its name implies a connection to saline conditions. The presence of a single replicon could indicate a streamlined genetic framework, potentially allowing for efficient adaptation to its habitat. While further details on its metabolic capabilities, ecological roles, or specific applications in biotechnological contexts remain unspecified, the strain's classification suggests possible interactions with other microorganisms within its ecosystem. Such interactions may contribute to nutrient cycling or other ecological processes in its native habitat. Understanding the characteristics of Sinimarinibacterium flocculans and its genomic structure can provide insights into the diversity of microbial life in marine settings and their functional roles within these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderNevskiales
FamilyNevskiaceae
GenusSinimarinibacterium
SpeciesSinimarinibacterium flocculans
Strainstrain DSM 104150

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinimarinibacterium flocculans strain DSM 104150 Ga0215726_139,

Gene Summary

Adenine Count

710524 bp

Thymine Count

703691 bp

Guanine Count

1497058 bp

Cytosine Count

1489595 bp

Genome Length

4401070 bp

Protein-coding Genes

4016 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
salicylate 5-hydroxylase small subunitC8D93_1176Not AvailableNegative4271793 - 427227518630.1
salicylate 5-hydroxylase large subunitC8D93_1177Not AvailableNegative4272272 - 427353447889.1
fumarylpyruvate hydrolaseC8D93_1178Not AvailableNegative4273553 - 427424824859.8
gentisate 1,2-dioxygenaseC8D93_1179Not AvailableNegative4274299 - 427534838760.1
ferredoxin-nad(p)+ reductase (naphthalene dioxygenase ferredoxin-specific)C8D93_11710Not AvailableNegative4275359 - 427634235201.0
formyl-coa transferaseC8D93_11711Not AvailablePositive4276497 - 427770543159.9
hydroxymethylglutaryl-coa lyaseC8D93_11712Not AvailablePositive4277702 - 427864333704.7
lysr family transcriptional regulatorC8D93_11713Not AvailableNegative4278633 - 427953834155.6
ethylbenzene dioxygenase ferredoxin subunitC8D93_11714Not AvailablePositive4279745 - 42800119515.26
aldehyde dehydrogenase (acceptor)C8D93_11715Not AvailablePositive4280046 - 428157255267.7

Displaying genes 3931 – 3940 of 4080 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.