Sinimarinibacterium flocculans strain DSM 104150

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Nevskiales

Family

Nevskiaceae

Genus

Sinimarinibacterium

Description

Sinimarinibacterium flocculans strain DSM 104150 is a microbial strain characterized by a single replicon, indicating a simplified genomic structure. The strain has been assigned the accession number QICN00000000.1, which serves as a unique identifier for its genomic data. The specific traits of Sinimarinibacterium flocculans suggest that it may play a role in ecological systems, particularly in marine environments where its name implies a connection to saline conditions. The presence of a single replicon could indicate a streamlined genetic framework, potentially allowing for efficient adaptation to its habitat. While further details on its metabolic capabilities, ecological roles, or specific applications in biotechnological contexts remain unspecified, the strain's classification suggests possible interactions with other microorganisms within its ecosystem. Such interactions may contribute to nutrient cycling or other ecological processes in its native habitat. Understanding the characteristics of Sinimarinibacterium flocculans and its genomic structure can provide insights into the diversity of microbial life in marine settings and their functional roles within these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderNevskiales
FamilyNevskiaceae
GenusSinimarinibacterium
SpeciesSinimarinibacterium flocculans
Strainstrain DSM 104150

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinimarinibacterium flocculans strain DSM 104150 Ga0215726_139,

Gene Summary

Adenine Count

710524 bp

Thymine Count

703691 bp

Guanine Count

1497058 bp

Cytosine Count

1489595 bp

Genome Length

4401070 bp

Protein-coding Genes

4016 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv pilus assembly protein pilmC8D93_11130Not AvailablePositive3674110 - 367519838810.4
type iv pilus assembly protein pilnC8D93_11131Not AvailablePositive3675275 - 367587422342.6
type iv pilus assembly protein piloC8D93_11132Not AvailablePositive3675871 - 367653624809.8
type iv pilus assembly protein pilpC8D93_11133Not AvailablePositive3676533 - 367703918564.3
type iv pilus assembly protein pilqC8D93_11134Not AvailablePositive3677072 - 367920476276.0
shikimate kinaseC8D93_11135Not AvailablePositive3679275 - 367980519378.2
3-dehydroquinate synthaseC8D93_11136Not AvailablePositive3679865 - 368097139273.3
dgtpaseC8D93_11137Not AvailablePositive3680968 - 368211644051.1
hypothetical proteinC8D93_11138Not AvailablePositive3682174 - 368258715176.2
trna(fmet)-specific endonuclease vapcC8D93_11139Not AvailableNegative3682591 - 368301615869.1

Displaying genes 3391 – 3400 of 4080 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.