Sinimarinibacterium flocculans strain DSM 104150

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Nevskiales

Family

Nevskiaceae

Genus

Sinimarinibacterium

Description

Sinimarinibacterium flocculans strain DSM 104150 is a microbial strain characterized by a single replicon, indicating a simplified genomic structure. The strain has been assigned the accession number QICN00000000.1, which serves as a unique identifier for its genomic data. The specific traits of Sinimarinibacterium flocculans suggest that it may play a role in ecological systems, particularly in marine environments where its name implies a connection to saline conditions. The presence of a single replicon could indicate a streamlined genetic framework, potentially allowing for efficient adaptation to its habitat. While further details on its metabolic capabilities, ecological roles, or specific applications in biotechnological contexts remain unspecified, the strain's classification suggests possible interactions with other microorganisms within its ecosystem. Such interactions may contribute to nutrient cycling or other ecological processes in its native habitat. Understanding the characteristics of Sinimarinibacterium flocculans and its genomic structure can provide insights into the diversity of microbial life in marine settings and their functional roles within these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderNevskiales
FamilyNevskiaceae
GenusSinimarinibacterium
SpeciesSinimarinibacterium flocculans
Strainstrain DSM 104150

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinimarinibacterium flocculans strain DSM 104150 Ga0215726_139,

Gene Summary

Adenine Count

710524 bp

Thymine Count

703691 bp

Guanine Count

1497058 bp

Cytosine Count

1489595 bp

Genome Length

4401070 bp

Protein-coding Genes

4016 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ost-hth/lotus domain-containing proteinC8D93_103115Not AvailableNegative1532308 - 153305427378.6
udp-n-acetylglucosamine 1-carboxyvinyltransferaseC8D93_103116Not AvailableNegative1533069 - 153433444798.8
bola protein family transcriptional regulatorC8D93_103117Not AvailableNegative1534435 - 15346537813.43
abc-2 type transport system permease proteinC8D93_103118Not AvailableNegative1534656 - 153542327989.0
abc-2 type transport system atp-binding proteinC8D93_103119Not AvailableNegative1535420 - 153634333792.1
deoxyribodipyrimidine photo-lyase type iC8D93_103120Not AvailablePositive1536421 - 153784552825.5
cation:h+ antiporterC8D93_103121Not AvailablePositive1537899 - 153887032801.4
arabinose-5-phosphate isomeraseC8D93_103122Not AvailablePositive1538883 - 153985433710.5
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)C8D93_103123Not AvailablePositive1539857 - 154037519108.0
lps export abc transporter protein lptcC8D93_103124Not AvailablePositive1540372 - 154094121315.0

Displaying genes 1421 – 1430 of 4080 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.