Dysgonomonas alginatilytica strain DSM 100214

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Dysgonomonadaceae

Genus

Indolivaga

Description

Dysgonomonas alginatilytica strain DSM 100214 is a bacterial strain characterized by a single replicon and is cataloged under the accession number QICL00000000.1. This strain is part of the Dysgonomonas genus, which is known for its role in various ecological niches, particularly in environments where complex organic matter is present. The presence of a single replicon suggests a streamlined genome organization, which may facilitate adaptability to specific environmental conditions. The characterization of such a strain is important for understanding its metabolic capabilities and ecological functions. Dysgonomonas species are often associated with the degradation of complex polysaccharides, indicating a potential role in biogeochemical cycles, particularly in the breakdown of alginate, a polysaccharide commonly found in brown seaweeds. Understanding the traits of Dysgonomonas alginatilytica strain DSM 100214 could provide insights into its ecological roles, particularly in marine environments where alginate is prevalent. This strain may contribute to the recycling of carbon and other nutrients, thus influencing nutrient dynamics and the overall health of marine ecosystems. The study of such bacteria is crucial for comprehending their interactions within microbial communities and their impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyDysgonomonadaceae
GenusIndolivaga
SpeciesIndolivaga alginatilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dysgonomonas alginatilytica strain DSM 100214 Ga0181043_173, whole

Gene Summary

Adenine Count

1618301 bp

Thymine Count

1620988 bp

Guanine Count

943179 bp

Cytosine Count

938109 bp

Genome Length

5120703 bp

Protein-coding Genes

4300 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trigger factorCLV62_102209Not AvailableNegative861897 - 86327051164.0
crp-like camp-binding proteinCLV62_102210Not AvailablePositive863644 - 86434526409.4
gh3 auxin-responsive promoterCLV62_102211Not AvailablePositive864342 - 86585657803.9
outer membrane protein assembly factor bamdCLV62_102212Not AvailablePositive865977 - 86684034233.8
rna polymerase rpb6CLV62_102213Not AvailablePositive866871 - 86720312886.1
uncharacterized protein duf4293CLV62_102214Not AvailablePositive867204 - 86766216879.4
glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii)CLV62_102215Not AvailableNegative867782 - 86842624070.7
16s rrna (guanine527-n7)-methyltransferaseCLV62_102216Not AvailableNegative868528 - 86914823223.3
uncharacterized protein duf3298CLV62_102217Not AvailableNegative869156 - 86990228906.6
hypothetical proteinCLV62_102218Not AvailablePositive870271 - 87070816375.9

Displaying genes 11 – 20 of 4382 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.