Dysgonomonas alginatilytica strain DSM 100214

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Dysgonomonadaceae

Genus

Indolivaga

Description

Dysgonomonas alginatilytica strain DSM 100214 is a bacterial strain characterized by a single replicon and is cataloged under the accession number QICL00000000.1. This strain is part of the Dysgonomonas genus, which is known for its role in various ecological niches, particularly in environments where complex organic matter is present. The presence of a single replicon suggests a streamlined genome organization, which may facilitate adaptability to specific environmental conditions. The characterization of such a strain is important for understanding its metabolic capabilities and ecological functions. Dysgonomonas species are often associated with the degradation of complex polysaccharides, indicating a potential role in biogeochemical cycles, particularly in the breakdown of alginate, a polysaccharide commonly found in brown seaweeds. Understanding the traits of Dysgonomonas alginatilytica strain DSM 100214 could provide insights into its ecological roles, particularly in marine environments where alginate is prevalent. This strain may contribute to the recycling of carbon and other nutrients, thus influencing nutrient dynamics and the overall health of marine ecosystems. The study of such bacteria is crucial for comprehending their interactions within microbial communities and their impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyDysgonomonadaceae
GenusIndolivaga
SpeciesIndolivaga alginatilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dysgonomonas alginatilytica strain DSM 100214 Ga0181043_173, whole

Gene Summary

Adenine Count

1618301 bp

Thymine Count

1620988 bp

Guanine Count

943179 bp

Cytosine Count

938109 bp

Genome Length

5120703 bp

Protein-coding Genes

4300 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoserine phosphataseCLV62_12945Not AvailableNegative4184191 - 418541445668.3
argininosuccinate lyaseCLV62_12946Not AvailableNegative4185517 - 418685750397.9
hypothetical proteinCLV62_12947Not AvailableNegative4186950 - 418737816259.7
orotate phosphoribosyltransferaseCLV62_12948Not AvailableNegative4187425 - 418805422974.7
hypothetical proteinCLV62_12949Not AvailableNegative4188008 - 41881967340.86
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayCLV62_12950Not AvailablePositive4188400 - 418897521670.7
peptidase c25-like proteinCLV62_12951Not AvailablePositive4189128 - 4192553127951.0
hypothetical proteinCLV62_12952Not AvailablePositive4192640 - 419380643027.7
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseCLV62_12953Not AvailablePositive4193871 - 419435017648.4
trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmcCLV62_12954Not AvailablePositive4194371 - 419506326402.5

Displaying genes 3581 – 3590 of 4382 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.