Dysgonomonas alginatilytica strain DSM 100214

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Dysgonomonadaceae

Genus

Indolivaga

Description

Dysgonomonas alginatilytica strain DSM 100214 is a bacterial strain characterized by a single replicon and is cataloged under the accession number QICL00000000.1. This strain is part of the Dysgonomonas genus, which is known for its role in various ecological niches, particularly in environments where complex organic matter is present. The presence of a single replicon suggests a streamlined genome organization, which may facilitate adaptability to specific environmental conditions. The characterization of such a strain is important for understanding its metabolic capabilities and ecological functions. Dysgonomonas species are often associated with the degradation of complex polysaccharides, indicating a potential role in biogeochemical cycles, particularly in the breakdown of alginate, a polysaccharide commonly found in brown seaweeds. Understanding the traits of Dysgonomonas alginatilytica strain DSM 100214 could provide insights into its ecological roles, particularly in marine environments where alginate is prevalent. This strain may contribute to the recycling of carbon and other nutrients, thus influencing nutrient dynamics and the overall health of marine ecosystems. The study of such bacteria is crucial for comprehending their interactions within microbial communities and their impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyDysgonomonadaceae
GenusIndolivaga
SpeciesIndolivaga alginatilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dysgonomonas alginatilytica strain DSM 100214 Ga0181043_173, whole

Gene Summary

Adenine Count

1618301 bp

Thymine Count

1620988 bp

Guanine Count

943179 bp

Cytosine Count

938109 bp

Genome Length

5120703 bp

Protein-coding Genes

4300 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hlyd family secretion proteinCLV62_11937Not AvailableNegative3411348 - 341233736134.8
outer membrane protein tolcCLV62_11938Not AvailableNegative3412369 - 341379052802.7
hypothetical proteinCLV62_11939Not AvailableNegative3414013 - 341454319857.6
alanine racemaseCLV62_11940Not AvailableNegative3414687 - 341715892950.6
gscfa family proteinCLV62_11941Not AvailableNegative3417264 - 341824738422.0
peptidase m28-like proteinCLV62_11942Not AvailableNegative3418333 - 341933136842.4
membrane-bound lytic murein transglycosylase fCLV62_11943Not AvailableNegative3419386 - 342078052794.4
hypothetical proteinCLV62_11944Not AvailablePositive3421020 - 342154119859.6
upf0176 proteinCLV62_11945Not AvailableNegative3421867 - 342289839132.9
atp-binding cassette, subfamily b, msbaCLV62_11946Not AvailableNegative3423096 - 342494969649.0

Displaying genes 2881 – 2890 of 4382 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.