Dysgonomonas alginatilytica strain DSM 100214

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Dysgonomonadaceae

Genus

Indolivaga

Description

Dysgonomonas alginatilytica strain DSM 100214 is a bacterial strain characterized by a single replicon and is cataloged under the accession number QICL00000000.1. This strain is part of the Dysgonomonas genus, which is known for its role in various ecological niches, particularly in environments where complex organic matter is present. The presence of a single replicon suggests a streamlined genome organization, which may facilitate adaptability to specific environmental conditions. The characterization of such a strain is important for understanding its metabolic capabilities and ecological functions. Dysgonomonas species are often associated with the degradation of complex polysaccharides, indicating a potential role in biogeochemical cycles, particularly in the breakdown of alginate, a polysaccharide commonly found in brown seaweeds. Understanding the traits of Dysgonomonas alginatilytica strain DSM 100214 could provide insights into its ecological roles, particularly in marine environments where alginate is prevalent. This strain may contribute to the recycling of carbon and other nutrients, thus influencing nutrient dynamics and the overall health of marine ecosystems. The study of such bacteria is crucial for comprehending their interactions within microbial communities and their impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyDysgonomonadaceae
GenusIndolivaga
SpeciesIndolivaga alginatilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dysgonomonas alginatilytica strain DSM 100214 Ga0181043_173, whole

Gene Summary

Adenine Count

1618301 bp

Thymine Count

1620988 bp

Guanine Count

943179 bp

Cytosine Count

938109 bp

Genome Length

5120703 bp

Protein-coding Genes

4300 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-linked susc/raga family outer membrane proteinCLV62_11382Not AvailableNegative2796063 - 2799209115723.0
unsaturated rhamnogalacturonyl hydrolaseCLV62_11383Not AvailableNegative2799344 - 280051645549.6
pectate lyase-like proteinCLV62_11384Not AvailableNegative2800627 - 280200950746.3
polygalacturonaseCLV62_11385Not AvailableNegative2802044 - 280368159984.4
uncharacterized protein duf4957CLV62_11386Not AvailableNegative2803791 - 280540459051.0
putative outer membrane starch-binding proteinCLV62_11387Not AvailableNegative2805424 - 280734072909.4
tonb-linked susc/raga family outer membrane proteinCLV62_11388Not AvailableNegative2807353 - 2810580118432.0
two component regulator with propeller domainCLV62_11389Not AvailablePositive2810983 - 2815413169933.0
uncharacterized protein duf4861CLV62_11390Not AvailablePositive2815837 - 281707245640.7
glucuronate isomeraseCLV62_11391Not AvailablePositive2817145 - 281855153795.9

Displaying genes 2361 – 2370 of 4382 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.