Dysgonomonas alginatilytica strain DSM 100214

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Dysgonomonadaceae

Genus

Indolivaga

Description

Dysgonomonas alginatilytica strain DSM 100214 is a bacterial strain characterized by a single replicon and is cataloged under the accession number QICL00000000.1. This strain is part of the Dysgonomonas genus, which is known for its role in various ecological niches, particularly in environments where complex organic matter is present. The presence of a single replicon suggests a streamlined genome organization, which may facilitate adaptability to specific environmental conditions. The characterization of such a strain is important for understanding its metabolic capabilities and ecological functions. Dysgonomonas species are often associated with the degradation of complex polysaccharides, indicating a potential role in biogeochemical cycles, particularly in the breakdown of alginate, a polysaccharide commonly found in brown seaweeds. Understanding the traits of Dysgonomonas alginatilytica strain DSM 100214 could provide insights into its ecological roles, particularly in marine environments where alginate is prevalent. This strain may contribute to the recycling of carbon and other nutrients, thus influencing nutrient dynamics and the overall health of marine ecosystems. The study of such bacteria is crucial for comprehending their interactions within microbial communities and their impact on environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyDysgonomonadaceae
GenusIndolivaga
SpeciesIndolivaga alginatilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dysgonomonas alginatilytica strain DSM 100214 Ga0181043_173, whole

Gene Summary

Adenine Count

1618301 bp

Thymine Count

1620988 bp

Guanine Count

943179 bp

Cytosine Count

938109 bp

Genome Length

5120703 bp

Protein-coding Genes

4300 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trmh family rna methyltransferaseCLV62_10933Not AvailablePositive2148542 - 214930929058.1
putative glycogen debranching enzymeCLV62_10934Not AvailablePositive2149436 - 215148778366.0
glycosyltransferase involved in cell wall biosynthesisCLV62_10935Not AvailablePositive2151514 - 215280947871.4
alpha-amylaseCLV62_10936Not AvailablePositive2152937 - 215428352282.1
phosphorylase/glycogen(starch) synthaseCLV62_10937Not AvailablePositive2154400 - 2158647161758.0
1,4-alpha-glucan branching enzymeCLV62_10938Not AvailablePositive2158797 - 216077076269.1
beta-glucosidaseCLV62_10939Not AvailableNegative2160851 - 216305281499.1
alpha-l-fucosidase 2CLV62_10940Not AvailableNegative2163153 - 216551388669.2
beta-glucosidaseCLV62_10941Not AvailableNegative2165510 - 216768480712.8
two component regulator with propeller domainCLV62_10942Not AvailableNegative2167928 - 2172049157988.0

Displaying genes 1841 – 1850 of 4382 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.