Cryobacterium arcticum strain SK-1

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Cryobacterium

Description

Cryobacterium arcticum strain SK-1 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, which is an important feature that can influence its genetic stability and replication efficiency. The genetic information for this strain can be accessed through the genomic accession number QHLY00000000.1, allowing for further study and analysis of its genetic makeup. The classification of Cryobacterium arcticum within the Gram-positive category indicates that it possesses a thick peptidoglycan layer in its cell wall, which is a defining characteristic of this group. Such structural features can play a role in the bacterium's resistance to certain environmental stressors, as well as its interactions with its ecosystem. From a biological and ecological perspective, the presence of Cryobacterium arcticum in its native habitat may suggest a specialized adaptation to cold environments, given its classification and the ecological context of the species. Understanding its traits and genomic characteristics can provide insights into its role in microbial communities, particularly in polar or cold habitats where it may contribute to nutrient cycling or influence the dynamics of other microorganisms. Overall, the study of Cryobacterium arcticum strain SK-1 could enhance our understanding of microbial life in extreme environments and its ecological significance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusCryobacterium
SpeciesCryobacterium arcticum
Strainstrain SK-1

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cryobacterium arcticum strain SK-1 scaffold8, whole genome shotgun

Gene Summary

Adenine Count

686026 bp

Thymine Count

690503 bp

Guanine Count

1465519 bp

Cytosine Count

1463462 bp

Genome Length

4305516 bp

Protein-coding Genes

3950 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr/acrr family transcriptional regulatorCTB96_03050Not AvailablePositive626998 - 62758821086.2
mfs transporterCTB96_03055Not AvailablePositive627923 - 62920945732.9
glycoside hydrolase 105 family proteinCTB96_03060Not AvailablePositive629291 - 63044543636.8
2-keto-4-pentenoate hydrataseCTB96_03065Not AvailablePositive630518 - 63140531505.3
carboxymuconolactone decarboxylaseCTB96_03070Not AvailableNegative631427 - 63218227149.6
twin-arginine translocase subunit tatcCTB96_03080Not AvailableNegative632731 - 63348927203.2
sec-independent protein translocase tataCTB96_03085Not AvailableNegative633534 - 6337708322.15
3,4-dioxygenase subunit betaCTB96_03090Not AvailableNegative633825 - 63479632829.4
2-dehydro-3-deoxyphosphogluconate aldolaseCTB96_03095Not AvailableNegative634918 - 63555321947.5
carbohydrate kinaseCTB96_03100Not AvailableNegative635553 - 63646131619.5

Displaying genes 611 – 620 of 4006 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.