Cryobacterium arcticum strain SK-1

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Cryobacterium

Description

Cryobacterium arcticum strain SK-1 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, which is an important feature that can influence its genetic stability and replication efficiency. The genetic information for this strain can be accessed through the genomic accession number QHLY00000000.1, allowing for further study and analysis of its genetic makeup. The classification of Cryobacterium arcticum within the Gram-positive category indicates that it possesses a thick peptidoglycan layer in its cell wall, which is a defining characteristic of this group. Such structural features can play a role in the bacterium's resistance to certain environmental stressors, as well as its interactions with its ecosystem. From a biological and ecological perspective, the presence of Cryobacterium arcticum in its native habitat may suggest a specialized adaptation to cold environments, given its classification and the ecological context of the species. Understanding its traits and genomic characteristics can provide insights into its role in microbial communities, particularly in polar or cold habitats where it may contribute to nutrient cycling or influence the dynamics of other microorganisms. Overall, the study of Cryobacterium arcticum strain SK-1 could enhance our understanding of microbial life in extreme environments and its ecological significance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusCryobacterium
SpeciesCryobacterium arcticum
Strainstrain SK-1

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cryobacterium arcticum strain SK-1 scaffold8, whole genome shotgun

Gene Summary

Adenine Count

686026 bp

Thymine Count

690503 bp

Guanine Count

1465519 bp

Cytosine Count

1463462 bp

Genome Length

4305516 bp

Protein-coding Genes

3950 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphataseCTB96_15310Not AvailableNegative3265106 - 326733481434.9
hypothetical proteinCTB96_15315Not AvailablePositive3267495 - 326830129187.9
yhge/pip domain-containing proteinCTB96_15320Not AvailableNegative3268358 - 327032864074.2
mmpl family transporterCTB96_15325Not AvailableNegative3270325 - 3273228100153.0
tetr family transcriptional regulatorCTB96_15330Not AvailableNegative3273232 - 327389123601.4
arsenic transporterCTB96_15335Not AvailableNegative3273959 - 327512840769.7
hypothetical proteinCTB96_15340Not AvailablePositive3275246 - 32754678112.94
hypothetical proteinCTB96_15345Not AvailablePositive3275574 - 327605616650.7
glsb/yeaq/ymge family stress response membrane proteinCTB96_15355Not AvailableNegative3277902 - 32781749284.76
biotin transporter bioyCTB96_15360Not AvailablePositive3278367 - 327897820826.3

Displaying genes 3031 – 3040 of 4006 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.