Cryobacterium arcticum strain SK-1

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Cryobacterium

Description

Cryobacterium arcticum strain SK-1 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, which is an important feature that can influence its genetic stability and replication efficiency. The genetic information for this strain can be accessed through the genomic accession number QHLY00000000.1, allowing for further study and analysis of its genetic makeup. The classification of Cryobacterium arcticum within the Gram-positive category indicates that it possesses a thick peptidoglycan layer in its cell wall, which is a defining characteristic of this group. Such structural features can play a role in the bacterium's resistance to certain environmental stressors, as well as its interactions with its ecosystem. From a biological and ecological perspective, the presence of Cryobacterium arcticum in its native habitat may suggest a specialized adaptation to cold environments, given its classification and the ecological context of the species. Understanding its traits and genomic characteristics can provide insights into its role in microbial communities, particularly in polar or cold habitats where it may contribute to nutrient cycling or influence the dynamics of other microorganisms. Overall, the study of Cryobacterium arcticum strain SK-1 could enhance our understanding of microbial life in extreme environments and its ecological significance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusCryobacterium
SpeciesCryobacterium arcticum
Strainstrain SK-1

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cryobacterium arcticum strain SK-1 scaffold8, whole genome shotgun

Gene Summary

Adenine Count

686026 bp

Thymine Count

690503 bp

Guanine Count

1465519 bp

Cytosine Count

1463462 bp

Genome Length

4305516 bp

Protein-coding Genes

3950 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridine nucleotide-disulfide oxidoreductaseCTB96_15210Not AvailableNegative3244948 - 324597335834.5
glutamate--trna ligaseCTB96_15215Not AvailableNegative3245970 - 324749056158.6
lysr family transcriptional regulatorCTB96_15220Not AvailableNegative3247503 - 324851935719.0
aminotransferaseCTB96_15225Not AvailablePositive3248646 - 324968936620.2
type 1 glutamine amidotransferase domain-containing proteinCTB96_15230Not AvailableNegative3249856 - 325056024633.9
nadp-dependent oxidoreductaseCTB96_15235Not AvailableNegative3250613 - 325162635061.8
tetr family transcriptional regulatorCTB96_15240Not AvailablePositive3251795 - 325237620454.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseCTB96_15245Not AvailableNegative3252476 - 325325526771.8
branched chain amino acid aminotransferaseCTB96_15250Not AvailableNegative3253252 - 325438541057.4
3-isopropylmalate dehydrogenaseCTB96_15255Not AvailableNegative3254401 - 325548337852.9

Displaying genes 3011 – 3020 of 4006 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.