Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter edaphi |
| Strain | strain NL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1043714 bp
Thymine Count
1035671 bp
Guanine Count
1982307 bp
Cytosine Count
1979635 bp
Genome Length
6041327 bp
Protein-coding Genes
4849 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DLM85_00090 | Not Available | Positive | 27388 - 27678 | 10439.5 |
| abc transporter permease | DLM85_00095 | Not Available | Negative | 27886 - 31500 | 132663.0 |
| abc transporter atp-binding protein | DLM85_00100 | Not Available | Negative | 31497 - 32453 | 34482.9 |
| sensor histidine kinase | DLM85_00105 | Not Available | Positive | 32692 - 33717 | 38627.1 |
| dna-binding response regulator | DLM85_00110 | Not Available | Positive | 33686 - 34414 | 28119.4 |
| nadp-dependent isocitrate dehydrogenase | DLM85_00115 | Not Available | Negative | 34504 - 35736 | 46354.2 |
| deaminase | DLM85_00120 | Not Available | Negative | 35971 - 36681 | 26248.4 |
| tolc family protein | DLM85_00125 | Not Available | Negative | 36838 - 38274 | 53258.5 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DLM85_00130 | Not Available | Negative | 38267 - 41458 | 116461.0 |
| efflux rnd transporter periplasmic adaptor subunit | DLM85_00135 | Not Available | Negative | 41565 - 42653 | 40733.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
