Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter edaphi |
| Strain | strain NL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1043714 bp
Thymine Count
1035671 bp
Guanine Count
1982307 bp
Cytosine Count
1979635 bp
Genome Length
6041327 bp
Protein-coding Genes
4849 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DLM85_20205 | Not Available | Positive | 4943503 - 4945290 | 65857.3 |
| cupin domain-containing protein | DLM85_20210 | Not Available | Positive | 4945280 - 4945639 | 12629.8 |
| pectate lyase | DLM85_20215 | Not Available | Positive | 4945667 - 4947730 | 75810.9 |
| altronate oxidoreductase | DLM85_20220 | Not Available | Positive | 4947746 - 4949269 | 56598.0 |
| altronate dehydratase | DLM85_20225 | Not Available | Positive | 4949464 - 4951116 | 58774.2 |
| glucuronate isomerase | DLM85_20230 | Not Available | Positive | 4951264 - 4952703 | 54821.7 |
| sugar kinase | DLM85_20235 | Not Available | Positive | 4952859 - 4953875 | 36985.0 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DLM85_20240 | Not Available | Positive | 4953899 - 4954576 | 24211.3 |
| mfs transporter | DLM85_20245 | Not Available | Positive | 4954580 - 4955947 | 49788.3 |
| nuclear transport factor 2 family protein | DLM85_20250 | Not Available | Positive | 4956144 - 4956617 | 17363.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
