Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter edaphi |
| Strain | strain NL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1043714 bp
Thymine Count
1035671 bp
Guanine Count
1982307 bp
Cytosine Count
1979635 bp
Genome Length
6041327 bp
Protein-coding Genes
4849 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DLM85_20155 | Not Available | Negative | 4928724 - 4929401 | 25239.2 |
| pyridoxal phosphate-dependent aminotransferase | DLM85_20160 | Not Available | Negative | 4929656 - 4930891 | 45260.4 |
| hypothetical protein | DLM85_20165 | Not Available | Negative | 4931012 - 4931314 | 11193.5 |
| aldehyde dehydrogenase | DLM85_20170 | Not Available | Negative | 4931391 - 4932935 | 56876.1 |
| glycoside hydrolase family 28 protein | DLM85_20175 | Not Available | Positive | 4933304 - 4934956 | 59381.3 |
| glycoside hydrolase family 88 protein | DLM85_20180 | Not Available | Positive | 4935249 - 4937087 | 68767.7 |
| laci family transcriptional regulator | DLM85_20185 | Not Available | Negative | 4937169 - 4938191 | 37613.9 |
| 2-deoxy-d-gluconate 3-dehydrogenase | DLM85_20190 | Not Available | Positive | 4938466 - 4939239 | 26955.3 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DLM85_20195 | Not Available | Positive | 4939331 - 4940149 | 30324.1 |
| tonb-dependent receptor | DLM85_20200 | Not Available | Positive | 4940191 - 4943475 | 119556.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
