Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter edaphi |
| Strain | strain NL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1043714 bp
Thymine Count
1035671 bp
Guanine Count
1982307 bp
Cytosine Count
1979635 bp
Genome Length
6041327 bp
Protein-coding Genes
4849 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DLM85_01925 | Not Available | Negative | 495125 - 496372 | 47273.5 |
| pig-l family deacetylase | DLM85_01930 | Not Available | Negative | 496570 - 497280 | 26523.4 |
| hypothetical protein | DLM85_01935 | Not Available | Negative | 497270 - 498208 | 34558.1 |
| pseudaminic acid synthase | DLM85_01940 | Not Available | Negative | 498391 - 499440 | 38121.7 |
| udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolase | DLM85_01945 | Not Available | Negative | 499451 - 501034 | 57202.0 |
| hypothetical protein | DLM85_01950 | Not Available | Negative | 501031 - 501768 | 25850.1 |
| gluconate 5-dehydrogenase | DLM85_01955 | Not Available | Negative | 501753 - 502544 | 27709.0 |
| hypothetical protein | DLM85_01960 | Not Available | Positive | 502712 - 505768 | 105502.0 |
| aldo/keto reductase | DLM85_01965 | Not Available | Negative | 505847 - 506749 | 32246.8 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | DLM85_01970 | Not Available | Negative | 506746 - 507918 | 43468.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
