Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter edaphi |
| Strain | strain NL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1043714 bp
Thymine Count
1035671 bp
Guanine Count
1982307 bp
Cytosine Count
1979635 bp
Genome Length
6041327 bp
Protein-coding Genes
4849 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc metalloprotease | DLM85_09630 | Not Available | Negative | 2413563 - 2414831 | 44659.8 |
| gtpase hflx | DLM85_09635 | Not Available | Negative | 2415053 - 2416417 | 51423.3 |
| hypothetical protein | DLM85_09640 | Not Available | Negative | 2416540 - 2417493 | 33321.2 |
| membrane or secreted protein | DLM85_09645 | Not Available | Negative | 2417481 - 2420099 | 96963.0 |
| glycosyltransferase family 1 protein | DLM85_09650 | Not Available | Positive | 2420548 - 2421666 | 41812.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DLM85_09655 | Not Available | Positive | 2421739 - 2422284 | 19937.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DLM85_09660 | Not Available | Negative | 2422380 - 2423681 | 46504.4 |
| hypothetical protein | DLM85_09665 | Not Available | Positive | 2423799 - 2426084 | 81128.1 |
| amidohydrolase | DLM85_09670 | Not Available | Negative | 2426210 - 2427049 | 31827.9 |
| aminotransferase | DLM85_09675 | Not Available | Negative | 2427169 - 2428329 | 42238.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
